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| View Original: | Maximum-Likelihood-Tree of Lactarius blennius and relativs.svg (201x85) | |||
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| Keywords: Maximum-Likelihood-Tree of Lactarius blennius and relativs.svg Evolutionary relationships of Lactarius blennius <br/> Figure Molecular Phylogenetic anaylsis of by Maximum Likelihood method The evolutionary history was inferred by Lactarius blennius using the Maximum Likelihood method based on the Tamura-Nei model The tree with the highest log likelihood -1630 1222 is shown The percentage of trees in which the associated taxa clustered together is shown next to the branches A Minimum Evolution tree was used as an initial tree in the heuristic search The tree is drawn to scale with branch lengths measured in the number of substitutions per site The analysis involved 12 rRNA-gene nucleotide sequences all obtained from the genbank All positions with less than 95 site coverage were eliminated That is fewer than 5 alignment gaps missing data and ambiguous bases were allowed at any position There were a total of 635 positions in the final dataset Evolutionary analyses were conducted in MEGA5 Evolutionary analyses were conducted in MEGA5 The two Lactarius subdulcis sequences were used as outgroup All sequences were aligned by the CustalW algorithm with standard settings <br/> List of the GenBank Sequences http //www ncbi nlm nih gov/nuccore/ AY606944 Lactarius blennius AY606944 http //www ncbi nlm nih gov/nuccore/ FJ348708 Lactarius cinereus FJ348708 http //www ncbi nlm nih gov/nuccore/ FJ348711 Lactarius cinereus FJ348711 http //www ncbi nlm nih gov/nuccore/ DQ421992 Lactarius flexuosus DQ421992 http //www ncbi nlm nih gov/nuccore/ AJ889961 Lactarius fluens - AJ889961 http //www ncbi nlm nih gov/nuccore/ HM189794 Lactarius necator HM189794 http //www ncbi nlm nih gov/nuccore/ JQ888186 Lactarius vietus JQ888186 http //www ncbi nlm nih gov/nuccore/ JF908266 Lactarius controversus JF908266 http //www ncbi nlm nih gov/nuccore/ AJ272246 Lactarius controversus AJ272246 http //www ncbi nlm nih gov/nuccore/ HM189802 Lactarius subdulcis HM189802 http //www ncbi nlm nih gov/nuccore/ HM189804 Lactarius subdulcis HM189804 http //www ncbi nlm nih gov/nuccore/ DQ421991 Lactarius trivialis DQ421991 http //www ncbi nlm nih gov/nuccore/ JF908275 Lactarius circellatus JF908275 own 2013-06-22 User Thkgk Cc-zero Lactarius blennius Lactarius fluens Lactarius cinereus Cc-zero Heuristic | ||||
