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| View Original: | Maximum Likelihood-Tree-Acanthobasidium-Aleurodiscus-Neoaleurodiscus.svg (145x134) | |||
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| Keywords: Maximum Likelihood-Tree-Acanthobasidium-Aleurodiscus-Neoaleurodiscus.svg Figure Evolutionary relationships of Acanthobasidium Aleurodiscus s s and Neoaleurodiscus<br/> The evolutionary history was inferred by using the Maximum Likelihood method based on the Tamura-Nei model 1 The tree with the highest log likelihood -3059 7469 is shown The percentage of trees in which the associated taxa clustered together is shown next to the branches Initial tree s for the heuristic search were obtained by applying the Neighbor-Joining method to a matrix of pairwise distances estimated using the Maximum Composite Likelihood MCL approach A discrete Gamma distribution was used to model evolutionary rate differences among sites 5 categories +G parameter 0 1542 The rate variation model allowed for some sites to be evolutionarily invariable +I 54 0453 sites The tree is drawn to scale with branch lengths measured in the number of substitutions per site The analysis involved 20 nucleotide sequences There were a total of 935 positions in the final dataset Evolutionary analyses were conducted in MEGA6 2 <br/> For all taxa the GenBank number of the DNA-sequence is shown All black sequences sequences are used bySheng-Hua Wu in his most parsimonious tree additional sequences are red 3<br/><br/> 1 Tamura K and Nei M 1993 Estimation of the number of nucleotide substitutions in the control region of mitochondrial DNA in humans and chimpanzees Molecular Biology and Evolution 10 512-526 <br/> 2 Tamura K Stecher G Peterson D Filipski A and Kumar S 2013 MEGA6 Molecular Evolutionary Genetics Analysis version 6 0 Molecular Biology and Evolution30 2725-2729 <br/> 3 Sheng-Hua Wu Dong-Mei Wang Shi-Yi Yu Neoaleurodiscus fujii a new genus and new species found at the timberline in Japan In The Mycological Society of America Hrsg Mycologia Vol 102 1 Lawrence 2010 S 217 “223<br/> ; List with GenBank Sequences http //www ncbi nlm nih gov/nuccore/AY039326 Aleurodiscus grantii strain T569 http //www ncbi nlm nih gov/nuccore/AY039312 Aleurodiscus amorphus strain HHB15282 http //www ncbi nlm nih gov/nuccore/AF506397 Aleurodiscus amorphus - AF506397 http //www ncbi nlm nih gov/nuccore/AY039315 Acanthobasicium penicillatum strain T322 http //www ncbi nlm nih gov/nuccore/AY039322 Aleurodiscus weirii strain HHB12678 http //www ncbi nlm nih gov/nuccore/AY039328 Acanthobasidium norvegicum strain T623 http //www ncbi nlm nih gov/nuccore/AY039317 Acanthobasidium aurantius strain T621 http //www ncbi nlm nih gov/nuccore/FJ799924 Neoaleurodiscus fujii strain Wu0807-41 http //www ncbi nlm nih gov/nuccore/AY039333 Acanthofungus rimosus AY039333 http //www ncbi nlm nih gov/nuccore/AY039311 Stereum rugosum AY039311 http //www ncbi nlm nih gov/nuccore/AY039319 Acanthophysium lividocaeruleum AY039319 http //www ncbi nlm nih gov/nuccore/AY039307 Xylobolus frustulatus AY039307 http //www ncbi nlm nih gov/nuccore/AY039310 Acanthophysium cerussatum AY039310 http //www ncbi nlm nih gov/nuccore/AY039331 Aleurobotrys botryosus AY039331 http //www ncbi nlm nih gov/nuccore/AF506438 Gloeocystidiopsis aff flamma AF506438 http //www ncbi nlm nih gov/nuccore/AY039332 Aleurodiscus mirabilis AY039332 http //www ncbi nlm nih gov/nuccore/AY039306 Aleurodiscus oakesii AY039306 http //www ncbi nlm nih gov/nuccore/AF506424 Peniophora cinerea subsp fagicola AF506424 http //www ncbi nlm nih gov/nuccore/AY039305 Acanthobasidium phragmitis AY039305 http //www ncbi nlm nih gov/nuccore/DQ873603 Hyphodontia alutaria DQ873603 own 2014-08-19 Thkgk Cc-zero Acanthobasidium Aleurodiscus penicillatus Aleurodiscus Neoaleurodiscus | ||||
